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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs13095196 chr3:39077138 G/T 4.8E-5 394 15.25 15.68 14.6 KM Plot
LGG rs131210 chr22:31749135 G/GA 8.75E-5 389 12.15 14.77 15.9 KM Plot
LGG rs13147760 chr4:108951739 C/G 3.41E-5 407 4.35 15.03 15.57 KM Plot
LGG rs13158202 chr5:43112570 A/T 0.000211 391 15.47 14.97 7.13 KM Plot
LGG rs13162715 chr5:43113009 A/G 0.000211 391 15.47 14.97 7.13 KM Plot
LGG rs13175313 chr5:80498034 C/T 6.07E-6 390 15.57 17.2 5.17 KM Plot
LGG rs13315800 chr3:168554559 G/A 2.4E-5 403 15.6 12.9 4.1 KM Plot
LGG rs13331205 chr16:67887532 C/A 2.16E-11 407 15.17 18.37 6.47 KM Plot
LGG rs13332450 chr16:67549170 T/C 0.000119 407 15.37 14.47 19.2 KM Plot
LGG rs13333582 chr16:67549547 T/C 9.02E-6 407 15.25 15.15 19.2 KM Plot
LGG rs13338776 chr16:4945987 A/G 2.66E-6 403 15.18 15.97 7.8 KM Plot
LGG rs13338993 chr16:67515312 A/G 0.000121 405 15.33 15.15 19.2 KM Plot
LGG rs1335481 chr1:78497532 A/G 3.45E-7 407 15.83 10.57 3.93 KM Plot
LGG rs13357088 chr5:914098 C/T 1.63E-8 407 14.92 19.57 6.63 KM Plot
LGG rs13377166 chr10:886259 G/A 2.47E-5 404 15.02 17.73 12.17 KM Plot